These are fits to provisional masks on the training runs, with unvalidated scan registration. Output resolutions, CAD mapping coverage, loss functions and epoch counts differ. The table can compare saved diagnostics; it cannot identify the best production predictor. Other model families have no held-out run scores.
Risk GNN: AC28 AP 0.764, IoU 0.309; ME1a AP 0.253, IoU 0.036. Its AC28 AP lead over Mesh GNN is 0.007. It does not lead AC28 IoU or either ME1a metric. The optimized residual GNN predicts risk only; Risk GNN also emits a deformation field.
| Model | AC28 AP | AC28 IoU | ME1a AP | ME1a IoU | AC28 coverage | ME1a coverage | AC28 epochs | ME1a epochs |
|---|---|---|---|---|---|---|---|---|
| Residual Geo GNN (individual) | 0.446 | 0.136 | 0.629 | 0.476 | 1.000 | 1.000 | 180 | 180 |
| Residual Geo GNN (joint) | 0.671 | 0.465 | 0.476 | 0.053 | 1.000 | 1.000 | 180 | 180 |
| FNO2d | 0.620 | 0.296 | 0.444 | 0.143 | 0.987 | 0.922 | 60 | 60 |
| 2D CNN/U-Net | 0.622 | 0.333 | 0.298 | 0.143 | 0.987 | 0.922 | 80 | 80 |
| Risk GNN | 0.764 | 0.309 | 0.253 | 0.036 | 1.000 | 1.000 | 400 | 400 |
| Sparse 3D U-Net | 0.359 | 0.047 | 0.112 | 0.019 | 1.000 | 1.000 | 100 | 100 |
| Dense 3D U-Net | 0.358 | 0.048 | 0.097 | 0.019 | 1.000 | 1.000 | 100 | 100 |
| PointNet | 0.093 | 0.114 | 0.076 | 0.009 | 1.000 | 0.997 | 120 | 120 |
| Mesh GNN | 0.758 | 0.147 | 0.045 | 0.021 | 1.000 | 1.000 | 100 | 100 |
| DGCNN | 0.002 | 0.000 | 0.038 | 0.065 | 0.736 | 0.630 | 100 | 100 |
| UV-Net | 0.076 | 0.043 | 0.011 | 0.011 | 0.979 | 0.966 | 100 | 100 |
| Tabular MLP | 0.002 | 0.000 | 0.001 | 0.000 | 1.000 | 1.000 | 120 | 120 |

The Risk GNN used both AC28 runs for its AC28 entry. Other original models used AC28 18h01. The residual GNN individual entry uses one run of each part; its joint entry uses both AC28 runs and ME1a. Every displayed score evaluates a run included in that model's training. Only the residual GNN has a separate leave-one-run-out experiment, and its held-out IoU was zero for all three runs. The five conditional diffusion variants generate outputs on different native domains; their diagnostic risk scores are in the main report and are not ranked here.
| Model | AC28 training | ME1a training |
|---|---|---|
| 2D CNN/U-Net | AC28 18h01 | ME1a 14h06 |
| FNO2d | AC28 18h01 | ME1a 14h06 |
| Dense 3D U-Net | AC28 18h01 | ME1a 14h06 |
| Sparse 3D U-Net | AC28 18h01 | ME1a 14h06 |
| PointNet | AC28 18h01 | ME1a 14h06 |
| DGCNN | AC28 18h01 | ME1a 14h06 |
| Mesh GNN | AC28 18h01 | ME1a 14h06 |
| Risk GNN | AC28 16h + 18h01 | ME1a 14h06 |
| UV-Net | AC28 18h01 | ME1a 14h06 |
| Tabular MLP | AC28 18h01 | ME1a 14h06 |
| Residual Geo GNN (individual) | AC28_18h01 | ME1a_14h06 |
| Residual Geo GNN (joint) | AC28_16h+AC28_18h01+ME1a_14h06 | AC28_16h+AC28_18h01+ME1a_14h06 |
Residual GNN held-out experiment · AC28 model gallery · ME1a model gallery
All metrics CSV · Machine-readable results · Main comparison report